BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F09SP1|AL426564
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1507 1586 0.0
>3x_Contig1507
Length = 11359
Score = 1586 bits (799), Expect = 0.0
Identities = 808/811 (99%), Gaps = 1/811 (0%)
Strand = Plus / Minus
Query: 1 ataaccgaaaactggatttggaagcttgcgtaaatatcttttgaatatgctcgttactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10046 ataaccgaaaactggatttggaagcttgcgtaaatatcttttgaatatgctcgttactgc 9987
Query: 61 gtgaacatcagtattttgctttccaaaatcgactttttcttcttctgcaaacattttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9986 gtgaacatcagtattttgctttccaaaatcgactttttcttcttctgcaaacattttctc 9927
Query: 121 gtattgctctatgataacctgactacctgattttctgtaaataccttcggccatcatata 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9926 gtattgctctatgataacctgactacctgattttctgtaaatac-ttcggccatcatata 9868
Query: 181 ttcagggtctgattcgatatagttgatgcatgttgtaatgattaatggaacatcccgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9867 ttcagggtctgattcgatatagttgatgcatgttgtaatgattaatggaacatcccgtct 9808
Query: 241 ttcatatgcacatcttgcaaccagggatgatccatagagagtttgtccatcagaactgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9807 ttcatatgcacatcttgcaaccagggatgatccatagagagtttgtccatcagaactgga 9748
Query: 301 agatgataaactgttccttggaacagagtcattcgacgcggaatagggaattgggaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9747 agatgataaactgttccttggaacagagtcattcgacgcggaatagggaattgggaaaag 9688
Query: 361 tttcaggtcatcaaattcatttggattctgtagcattggagcactaatttctatggattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9687 tttcaggtcatcaaattcatttggattctgtagcattggagcactaatttctatggattt 9628
Query: 421 ggaagaatttggattgacctgtcttacattagtattcccacttccgaaaagtttccaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9627 ggaagaatttggattgacctgtcttacattagtattcccacttccgaaaagtttccaaaa 9568
Query: 481 tcgargtwttgcaatactgctattggatgtagaagggagttggtttctagtagggcttag 540
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9567 tcgaggttttgcaatactgctattggatgtagaagggagttggtttctagtagggcttag 9508
Query: 541 agcattattgcttccgttgaaatccacctcgtatgcgtcgtcagttaatgattcttgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9507 agcattattgcttccgttgaaatccacctcgtatgcgtcgtcagttaatgattcttgtga 9448
Query: 601 tgtcgtcgttaatttgagatcccgtttttcaattcgaagggcttcggtttctgacgtcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9447 tgtcgtcgttaatttgagatcccgtttttcaattcgaagggcttcggtttctgacgtcaa 9388
Query: 661 agtctcttttgtaatctttagtttttcaatgtcagcagttaattgagccttcgtcagttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9387 agtctcttttgtaatctttagtttttcaatgtcagcagttaattgagccttcgtcagttg 9328
Query: 721 taattccttgacctccatattaagtttccttaactgcaaactgatagatttcacgtcctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9327 taattccttgacctccatattaagtttccttaactgcaaactgatagatttcacgtcctt 9268
Query: 781 ttcgaagaaatcttttgccacaggagtgaat 811
|||||||||||||||||||||||||||||||
Sbjct: 9267 ttcgaagaaatcttttgccacaggagtgaat 9237
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6562
Number of Sequences: 1807
Number of extensions: 6562
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)